• E. van den Bos, M. de Rooij, S.R. Sumter, P.M. Westenberg (2016). Continued development of recursive thinking in adolescence: Longitudinal analyses with a revised recursive thinking test. Cognitive Development 37, 28-41. Article
  • P. Spinhoven, B.M. Elzinga, A.M. Van Hemert, M. de Rooij, B.W. Penninx (2016). Childhood maltreatment, maladaptive personality types and level and course of psychological distress: a six-year longitudinal study. Journal of affective disorders. 191, 100-108. Article
  • M. de Rooij (2016). Transitional modeling of experimental longitudinal data with missing values. Advances in Data Analysis and Classification, xx, 1-24. Article.


  • H.V. Eeren, M.D. Spreeuwenberg, A. Bartak, M. de Rooij, J.J.V. Busschbach (2015). Estimating Subgroup Effects Using the Propensity Score Method: A Practical Application in Outcomes Research. Medical Care, 53, 366-373. Article
  • N. Khalili-Mahani, N.K., Niesters, M., van Osch, M.J., Oitzl, M., Veer, I., de Rooij, M., van Gerven, J., van Buchem, M.A., Beckmann, C.F., and Rombouts, S.A.R.B. (2015). Ketamine Interactions with Biomarkers of Stress: A randomized placebo-controlled repeated measures resting-state fMRI and PCASL pilot study in healthy men. NeuroImage, 108, 396-409. Article
  • P. Spinhoven, J. Drost, M. de Rooij, A.M. van Hemert, B.W.J.H. Penninx (2015). Is Experiential Avoidance a Mediating, Moderating, Independent, Overlapping, or Proxy Risk Factor in the Onset, Relapse and Maintenance of Depressive Disorders? Cognitive Therapy and Research, 1-14. Article
  • M. de Rooij, P.G.M. van der Heijden (2015). Correspondence Analysis of Longitudinal Data. Wiley StatsRef: Statistics Reference Online. Article
  • R. Meuwese, E.A. Crone, M. Rooij, B. Güroğlu (2015). Development of equity preferences in boys and girls across adolescence. Child Development, 86, 145-158. Article


  • Spinhoven, P., Penninx, B.W., van Hemert, A.M., de Rooij, M., and Elzinga, B.M. (2014). Comorbidity of PTSD in anxiety and depressive disorders: prevalence and shared risk factors. Child Abuse & Neglect, 38, 1320-1330. Article
  • Vera, F.J., De Rooij, M., and Heiser, W.J. (2014). A latent class distance association model for cross-classified data with a categorical response variable. British Journal of Mathematical and Statistical Psychology, 67, 514-540. Article
  • Spinhoven, P., Penelo, E., de Rooij, M., Penninx, B.W., and Ormel, J. (2014). Reciprocal effects of stable and temporary components of neuroticism and affective disorders: Results of a longitudinal cohort study. Psychological Medicine, 44, 337-348. Article
  • Van den Bos, E., de Rooij, M., Miers, A.C., Bokhorst, C.L. and Westenberg, P.M. (2014) Adolescents' Increasing Stress Response to Social-Evaluation: Pubertal Effects on Cortisol and alpha-Amylaseduring Public Speaking. Child Development., 85, 220-236. Article
  • Khalili-Mahani, N., Van Osch, M.J., De Rooij, M, Beckmann, C.F., van Buchem, M.A., Dahan, A., van Gerven, J.M., and Rombouts S.A.R.B. (2013). Spatial heterogeneity of the relation between resting-state connectivity and blood flow: An important consideration for pharmacological studies. Human Brain Mapping, 35, 929-942. DOI: 10.1002/hbm.22224. Article
  • Rieffe, C., De Bruine, M., De Rooij, M., and Stockmann, L. (2014) Approach and avoidant emotion regulation prevent depressive symptoms in children with an Autism Spectrum Disorder. International Journal of Developmental Neuroscience, 39, 37-43. Article
  • Spinhoven, P., Drost, J., de Rooij, M., van Hemert, A.M., and Penninx, B.W. (2014). A longitudinal study of experiential avoidance in emotional disorders. Behavior Therapy, 45, 840-850. Article
  • Spinhoven, P., Elzinga, B.M., van Hemert, A.M., de Rooij, M., and Penninx, B.W. (2014). A longitudinal study of facets of extraversion in depression and social anxiety. Personality and Individual Differences, 71, 39-44. Article


  • Yu, H.-T. and De Rooij, M. (2013). Model selection for the trend vector model. Journal of Classification, 30, 338-369. Article
  • Wehrens, R. and De Rooij, M (2013). Discussion on the paper "How to find an appropriate clustering for mixed-type variables with application to socio-economic stratification" by C. Hennig and T. F. Liao in Journal of the Royal Statistical Society, C, 62, 309-369
  • Miers, A.C., Blöte, A.W., De Rooij, M., Bokhorst, C.L., and Westenberg, P.M. (2013). Trajectories of Social Anxiety during Adolescence and Relations with Cognition, Social Competence and Temperament. Journal of Abnormal Child Psychology. Article


  • De Rooij, M. and Schouteden, M. (2012). The Mixed Effects Trend Vector Model. Multivariate Behavioral Research. Article (paper including SAS code)
  • De Rooij, M. (2012). An application of the mixed effects trend vector model to asymmetric change data with auxiliary variables. Behaviormetrika, 39, 75-90. Article
  • De Rooij, M. and Worku, H.M. (2012). A warning concerning the estimation of multinomial logistic models with correlated responses in SAS. Computer Methods and Programs in Biomedicine, 107, 341-346. Article
  • Polak, M.G., De Rooij, M., &Heiser, W.J. (2012). Diagnostics for single-peakedness of item responses with ordered conditional means. Multivariate Behavioral Research.
  • Rieffe, C., De Rooij, M. (2012). The longitudinal relationship between emotion awareness and internalising symptoms during late childhood. European Child & Adolescent Psychiatry, 21, 349-346. Article
  • Philip Spinhoven, Mark de Rooij, Willem Heiser, Jan H. Smit, and Brenda W. J. H. Penninx (2012). Personality and Changes in Comorbidity Patterns Among Anxiety and Depressive Disorders. Journal of Abnormal Psychology. Article
  • Kathelijne MHH Bessems, Patricia van Assema, Marloes K Martens, Theo GWM Paulussen, Lieke GM Raaijmakers, Mark de Rooij and Nanne K de Vries (2012). Healthier food choices as a result of the revised healthy diet programme Krachtvoer for students of prevocational schools. International Journal of Behavioral Nutrition and Physical Activity, 9:60. Article
  • Kouwenberg M, Rieffe C, Theunissen SCPM, De Rooij M (2012) Peer Victimization Experienced by Children and Adolescents Who Are Deaf or Hard of Hearing. PLoS ONE 7(12): e52174. doi:10.1371/journal.pone.0052174. Article


  • De Rooij, M. (2011). Transitional ideal point models for longitudinal multinomial outcomes. Statistical Modeling, 11, 115-135. Article
  • P.C. Koolschijn, Margot Schel, Mark de Rooij, Serge Rombouts, and Eveline Crone (2011). A 3-year longitudinal fMRI study of performance monitoring and test-retest reliability from childhood to early adulthood. Journal of Neuroscience, 31, 4204-4212. Article


  • Hagenaars, M. Van Minnen, A. & De Rooij, M (2010). Cognitions as a mechanism for change in prolonged exposure treatment for PTSD. International Journal of clinical and Health Psychology, 10, 421-434. Article.
  • De Rooij, M. and Yu, H-T. (2010). The trend vector model: Identification and estimation in SAS. In Locarek-Junge, H. &Weihs, C. (Eds): Classification as a tool for research, (pp. 245-252). Heidelberg: Springer.


  • Spinhoven, P., De Rooij, M., Heiser, W.J., Penninx, B. and Smit, J. (2009). The Role of Personality in Comorbidity among Anxiety and Depressive Disorders in Primary Care and Specialty Care: A Cross-Sectional Analysis. General Hospital Psychiatry, 31, 470-477. Article
  • De Rooij, M. (2009). Ideal point discriminant analysis with a special emphasis on visualisation. Psychometrika, 74, 317-330. Article
  • Polak, M.G., Heiser, W.J. and De Rooij, M. (2009). Two types of single-peaked data: correspondence analysis as an alternative to principal component analysis, Computational Statistics and Data Analysis, 53, 3117-3128. Article
  • Busing, F.M.T.A. and De Rooij, M. (2009). Unfolding incomplete data. Journal of Classification, 26, 329-360. Article
  • De Rooij, M. (2009). Trend vector models for the analysis of change in continuous time for multiple groups. Computational Statistics and Data Analysis, .53, 3209-3216. Article


  • De Rooij, M. (2008). The analysis of change, Newton's law of gravity, and Association models. Journal of the Royal Statistical Society, series A. 171, 137-157. Article


  • De Kwaatsteniet, E.W., Wit, A., Van Dijk, E., De Cremer, D. and De Rooij, M. (2007). Justifying Decisions in Social Dilemmas: Justification Pressures and Tacit Coordination under Environmental uncertainty. Personality and Social Psychology Bulletin, 33, 1648-1660. Article
  • De Rooij, M. & Anderson, C.J. (2007). Visualising, Summarizing and Comparing odds ratio structures. Methodology, 3, 139-148. Article
  • De Rooij, M. (2007). The distance perspective of generalized biadditive models: scalings and transformations. Journal of Computational and Graphical Statistics, 16, 210-227. Article
  • De Rooij, M. (2007). The use of covariates in distance association models for the analysis of change. In: Van Montfort, K., Oud, H., and Sattora, A. (Eds) "Longitudinal models in the behavioral and related sciences", (pp. 367-380). Mahwah, New Jersey: Lawrence Erlbaum Associates. Article


  • De Rooij, M. and Heiser, W.J. (2005). Graphical Representations and Odds Ratios in a Distance Association Model for the Analysis of Cross Classified Data, Psychometrika, 70, 99-122. Article


  • De Rooij, M. and Kroonenberg, P.M. (2003). Multivariate multinomial logit models for dyadic sequential interaction data, Multivariate Behavioral Research, 38, 463-504. Article
  • De Rooij, M. and Gower, J.C. (2003). The geometry of triadic distances, Journal of Classification, 20, 181-220. Article
  • Gower, J.C. and De Rooij, M. (2003). A comparison of the multidimensional scaling of triadic and dyadic distances, Journal of Classification, 20, 115-136. Article
  • De Rooij, M. and Heiser, W.J. (2003). A distance representation of the quasi-symmetry model and related distance models. In Yanai, H., Okada, A., Shigemasu, K. Kano, Y. and Meulman, J.J. (Eds). New developments in Psychometrics, pp. 487-494. Tokyo: Springer-Verlag
  • Frank, L.E., De Rooij, M. and Heiser, W.J. (2003). Monte Carlo simulation in three-way unfolding: Assessing the combined effect of sparseness and variation of the cell frequencies. In Yanai, H., Okada, A., Shigemasu, K. Kano, Y. and Meulman, J.J. (Eds). New developments in Psychometrics, pp. 511-518. Tokyo: Springer-Verlag. Article


  • De Rooij, M. (2002). Three-way distance models and three-way association. Journal of Classification, 19, 161-178. Article
  • De Rooij, M. (2002). Studying triadic distance models under a likelihood function. In Nishisato, S., Baba, Y. Bozdogan, H., and Kanefuji, K. (Eds). Measurement and Multivariate Analysis, pp. 69-76. Tokyo: Springer-Verlag. Article


  • De Rooij, M. (2001). Distance-Association models for the analysis of repeated transition frequency tables. Statistica Neerlandica, 55, 156-180. Article
  • De Rooij, M. (2001). Distance models for the analysis of transition frequency data. Doctoral thesis. Leiden University.


  • De Rooij, M. and Heiser, W.J. (2000). Triadic distance models for the analysis of asymmetric three-way proximity data. British Journal of Mathematical and Statistical Psychology, 53, 99-119. Article